STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX84658.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
KGQ21429.1
Enterobactin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
KGQ21436.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KGQ21432.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KGQ21222.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
KGQ23081.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
KGQ21610.2
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
lon
DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
       0.536
KGQ22140.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
KGQ20961.1
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
KGQ22282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.