STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ22559.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
KGQ21489.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.961
KGQ21189.1
Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.921
KGQ20975.2
2,6-dioxo-6-phenylhexa-3-enoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KGQ20902.1
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KGQ21764.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KIX84548.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KGQ22947.2
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KGQ21257.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.855
KGQ22561.1
DNA repair protein Rad52; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.831
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
    
  0.778
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.