STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ21961.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
KGQ21960.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KGQ21959.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KGQ22960.1
Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.998
KGQ23002.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.919
KGQ22506.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.911
KIX84752.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.907
KGQ21347.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.903
KGQ22896.2
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.899
KGQ22373.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.890
KGQ22616.1
Outer membrane protein/protective antigen OMA87; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.838
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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