STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmECytochrome C biogenesis protein DsbF; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (142 aa)    
Predicted Functional Partners:
KGQ23021.1
Cytochrome C assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
KGQ23013.1
Cytochrome C biogenesis protein CcmF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
KIX84475.1
Cytochrome C biogenesis protein CcmH; Possible subunit of a heme lyase.
 
  
 0.969
KIX84476.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
KGQ23029.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.913
KGQ23011.1
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.903
KGQ22759.2
Cytochrome C biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.855
KIX84477.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
KGQ23033.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.525
KIX84478.1
Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.476
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.