Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KGQ23014.1Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)    
Predicted Functional Partners:
KGQ23033.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KIX84481.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
KGQ23017.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
KGQ23035.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.975
KGQ23032.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.973
KGQ23010.1
Sulfur oxidation protein SoxB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
 
  
 0.972
KGQ23024.2
Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
KGQ23025.2
Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
KGQ23015.2
Sulfide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
KGQ22320.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.841
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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