KGQ23035.2 protein (Thermus filiformis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KGQ23035.2

Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)

Predicted Functional Partners:

KGQ22637.2

0.999

KGQ22626.2

0.999

KGQ22918.1

0.996

KIX84481.1

0.994

KGQ23017.1

0.993

KGQ23010.1

0.992

KGQ23025.2

0.989

KGQ23024.2

0.988

KGQ23014.1

0.984

KGQ23033.1

0.978

Your Current Organism:

Thermus filiformis

NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGQ22626.2	KGQ22637.2	THFILI_04575	THFILI_04570	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	0.999
KGQ22626.2	KGQ22918.1	THFILI_04575	THFILI_06290	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
KGQ22626.2	KGQ23017.1	THFILI_04575	THFILI_06010	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KGQ22626.2	KGQ23033.1	THFILI_04575	THFILI_05965	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KGQ22626.2	KGQ23035.2	THFILI_04575	THFILI_05995	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGQ22626.2	KIX84481.1	THFILI_04575	THFILI_05990	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KGQ22637.2	KGQ22626.2	THFILI_04570	THFILI_04575	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.999
KGQ22637.2	KGQ22918.1	THFILI_04570	THFILI_06290	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
KGQ22637.2	KGQ23017.1	THFILI_04570	THFILI_06010	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KGQ22637.2	KGQ23033.1	THFILI_04570	THFILI_05965	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KGQ22637.2	KGQ23035.2	THFILI_04570	THFILI_05995	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGQ22637.2	KIX84481.1	THFILI_04570	THFILI_05990	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KGQ22918.1	KGQ22626.2	THFILI_06290	THFILI_04575	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.642
KGQ22918.1	KGQ22637.2	THFILI_06290	THFILI_04570	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B561; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	0.734
KGQ22918.1	KGQ23010.1	THFILI_06290	THFILI_06000	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein SoxB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.	0.643
KGQ22918.1	KGQ23014.1	THFILI_06290	THFILI_05970	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
KGQ22918.1	KGQ23017.1	THFILI_06290	THFILI_06010	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
KGQ22918.1	KGQ23024.2	THFILI_06290	THFILI_06020	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
KGQ22918.1	KGQ23025.2	THFILI_06290	THFILI_06015	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
KGQ22918.1	KGQ23033.1	THFILI_06290	THFILI_05965	Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555