STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ23025.2Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
KGQ23010.1
Sulfur oxidation protein SoxB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
 
 
 0.999
KGQ23024.2
Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KIX84481.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KGQ23035.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KGQ23017.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KGQ23032.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
KGQ23033.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KGQ23014.1
Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KGQ22320.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
KGQ23023.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.