KGQ22910.1 protein (Thermus filiformis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Thermus filiformis

NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGQ21751.2	KGQ22571.1	THFILI_06785	THFILI_06180	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KGQ21751.2	KGQ22910.1	THFILI_06785	THFILI_06245	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
KGQ22408.1	KGQ22910.1	THFILI_05755	THFILI_06245	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
KGQ22571.1	KGQ21751.2	THFILI_06180	THFILI_06785	Chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KGQ22571.1	KGQ22910.1	THFILI_06180	THFILI_06245	Chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
KGQ22906.1	KGQ22907.1	THFILI_06265	THFILI_06240	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
KGQ22906.1	KGQ22909.1	THFILI_06265	THFILI_06250	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
KGQ22906.1	KGQ22910.1	THFILI_06265	THFILI_06245	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.575
KGQ22906.1	KGQ22911.1	THFILI_06265	THFILI_06260	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KGQ22906.1	KGQ22912.1	THFILI_06265	THFILI_06255	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
KGQ22907.1	KGQ22906.1	THFILI_06240	THFILI_06265	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
KGQ22907.1	KGQ22908.1	THFILI_06240	THFILI_06235	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
KGQ22907.1	KGQ22909.1	THFILI_06240	THFILI_06250	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
KGQ22907.1	KGQ22910.1	THFILI_06240	THFILI_06245	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
KGQ22907.1	KGQ22911.1	THFILI_06240	THFILI_06260	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
KGQ22907.1	KGQ22912.1	THFILI_06240	THFILI_06255	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.589
KGQ22908.1	KGQ22907.1	THFILI_06235	THFILI_06240	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
KGQ22908.1	KGQ22910.1	THFILI_06235	THFILI_06245	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
KGQ22909.1	KGQ22906.1	THFILI_06250	THFILI_06265	Derived by automated computational analysis using gene prediction method: Protein Homology.	Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
KGQ22909.1	KGQ22907.1	THFILI_06250	THFILI_06240	Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601