Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGQ22963.1Pyruvyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
KGQ22959.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.953
KGQ21732.1
UDP-N-acetyl-D-mannosaminuronic acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.
   
 0.887
udk
Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.798
KGQ22950.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KGQ20961.1
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
KGQ22960.1
Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.723
KGQ21413.2
LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
KGQ20897.1
LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
KGQ21677.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.631
KIX84576.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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