Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGQ22076.2Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa)    
Predicted Functional Partners:
KGQ21958.1
Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KGQ22498.2
Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KGQ21072.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KGQ22073.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.595
KGQ22839.2
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.456
KGQ21634.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.437
KGQ20865.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.433
KGQ22682.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.433
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 0.433
polA
DNA polymerase I; Has 5'-3' exonuclease activity and no 3'-5' exonuclease activity.
    
 0.432
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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