STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ22177.1Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KGQ22137.2
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
KGQ22175.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
KGQ22178.2
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.954
KGQ22174.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
KIX84833.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.848
KGQ23047.2
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.686
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.490
argS
arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
KGQ22176.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
pheS
phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.447
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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