Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGQ22227.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1184 aa)    
Predicted Functional Partners:
KIX84710.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.713
KGQ22293.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.709
KGQ22231.2
Octaprenyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
       0.580
KIX84329.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.524
KIX84653.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.520
KGQ22232.2
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.510
KGQ22229.1
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.501
KGQ22230.2
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.501
KGQ21990.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
   0.458
KGQ22045.2
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.450
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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