Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KGQ21634.1 | KGQ22839.2 | THFILI_09185 | THFILI_06775 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.574 |
| KGQ21634.1 | KGQ22918.1 | THFILI_09185 | THFILI_06290 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| KGQ21634.1 | KGQ22933.2 | THFILI_09185 | THFILI_09095 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| KGQ22839.2 | KGQ21634.1 | THFILI_06775 | THFILI_09185 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
| KGQ22839.2 | KGQ22918.1 | THFILI_06775 | THFILI_06290 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.749 |
| KGQ22839.2 | KGQ22933.2 | THFILI_06775 | THFILI_09095 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| KGQ22918.1 | KGQ21634.1 | THFILI_06290 | THFILI_09185 | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| KGQ22918.1 | KGQ22839.2 | THFILI_06290 | THFILI_06775 | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.749 |
| KGQ22918.1 | KGQ22933.2 | THFILI_06290 | THFILI_09095 | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| KGQ22933.2 | KGQ21634.1 | THFILI_09095 | THFILI_09185 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| KGQ22933.2 | KGQ22839.2 | THFILI_09095 | THFILI_06775 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.449 |
| KGQ22933.2 | KGQ22918.1 | THFILI_09095 | THFILI_06290 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| KGQ22933.2 | thiI | THFILI_09095 | THFILI_09100 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.543 |
| thiI | KGQ22933.2 | THFILI_09100 | THFILI_09095 | Hypothetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.543 |