STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ22868.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
KGQ20891.1
Phytochrome sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
KGQ21188.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
KGQ21049.2
Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.816
KGQ21439.2
Twitching motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.804
KIX84413.1
Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.803
KGQ22869.2
NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KGQ21076.2
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.705
KGQ22448.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.642
secF
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.556
KIX84503.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
     
 0.528
Your Current Organism:
Thermus filiformis
NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.