KGQ22364.2 protein (Thermus filiformis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Thermus filiformis

NCBI taxonomy Id: 276
Other names: ATCC 43280, DSM 4687, JCM 11600, T. filiformis, strain Wai33 A1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGQ21058.2	KGQ22035.2	THFILI_12005	THFILI_00400	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KGQ21058.2	KGQ22363.2	THFILI_12005	THFILI_12015	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
KGQ21058.2	KGQ22364.2	THFILI_12005	THFILI_12010	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.971
KGQ21058.2	KGQ22365.2	THFILI_12005	THFILI_12020	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
KGQ21058.2	KIX84710.1	THFILI_12005	THFILI_03905	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463
KGQ21058.2	topA	THFILI_12005	THFILI_04890	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.461
KGQ21321.2	KGQ22364.2	THFILI_00930	THFILI_12010	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.443
KGQ21321.2	KIX84710.1	THFILI_00930	THFILI_03905	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
KGQ21321.2	rsmG	THFILI_00930	THFILI_11385	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	16S rRNA methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.529
KGQ21321.2	topA	THFILI_00930	THFILI_04890	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.991
KGQ21541.1	KGQ22035.2	THFILI_01025	THFILI_00400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KGQ21541.1	KGQ22364.2	THFILI_01025	THFILI_12010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.882
KGQ21541.1	KIX84710.1	THFILI_01025	THFILI_03905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
KGQ21541.1	topA	THFILI_01025	THFILI_04890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.461
KGQ22035.2	KGQ21058.2	THFILI_00400	THFILI_12005	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KGQ22035.2	KGQ21541.1	THFILI_00400	THFILI_01025	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KGQ22035.2	KGQ22364.2	THFILI_00400	THFILI_12010	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.871
KGQ22035.2	topA	THFILI_00400	THFILI_04890	CobQ/CobB/MinD/ParA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.461
KGQ22363.2	KGQ21058.2	THFILI_12015	THFILI_12005	DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
KGQ22363.2	KGQ22364.2	THFILI_12015	THFILI_12010	DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.620