STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000000046annotation not available (75 aa)    
Predicted Functional Partners:
ndufb1
NADH:ubiquinone oxidoreductase subunit B1.
   
  
 0.778
ndufb4
NADH:ubiquinone oxidoreductase subunit B4.
   
    0.749
LOC114650864
Cytochrome c oxidase copper chaperone.
   
  
 0.592
ndufa2
NADH:ubiquinone oxidoreductase subunit A2.
   
    0.521
ENSECRP00000019819
annotation not available
      
 0.485
ENSECRP00000002201
annotation not available
    
 
 0.480
pum2
Pumilio RNA binding family member 2.
    
 
 0.480
pum1
Pumilio RNA binding family member 1.
    
 
 0.480
LOC114668931
Cytochrome b-c1 complex subunit 9.
   
  
 0.464
LOC114667733
Cytochrome c oxidase subunit 5A, mitochondrial.
   
  
 0.417
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.