STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000000130annotation not available (265 aa)    
Predicted Functional Partners:
sorl1
Sortilin related receptor 1.
    
 0.706
ntf3
Neurotrophin 3.
    
  0.660
LOC114660777
Neurotrophin-4-like.
    
  0.660
ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.630
LOC114663558
Tumor necrosis factor receptor superfamily member 16-like.
    
  0.510
fcer1g
Fc fragment of IgE receptor Ig.
   
 
 0.505
ngf
Nerve growth factor.
     
 0.484
bdnf
Brain derived neurotrophic factor.
     
 0.471
glod4
Glyoxalase domain containing 4.
    
  0.469
pdgfb
Platelet derived growth factor subunit B.
   
 
  0.461
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.