STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647900long-chain-fatty-acid--CoA ligase 1-like. (704 aa)    
Predicted Functional Partners:
acsl3
acyl-CoA synthetase long chain family member 3.
  
 
0.879
LOC114654399
long-chain-fatty-acid--CoA ligase ACSBG2-like.
  
 
 
0.872
acsbg1
acyl-CoA synthetase bubblegum family member 1.
  
 
 
0.871
LOC114662617
long-chain-fatty-acid--CoA ligase ACSBG2-like.
  
 
 
0.869
fasn
Fatty acid synthase.
   
 0.866
LOC114662540
long-chain-fatty-acid--CoA ligase 4-like.
  
 
0.860
LOC114662541
long-chain-fatty-acid--CoA ligase 4-like.
  
 
0.859
ppt2
Palmitoyl-protein thioesterase 2.
    
 0.858
ppt1
Palmitoyl-protein thioesterase 1.
    
 0.858
LOC114647330
Carnitine O-palmitoyltransferase 1, liver isoform-like.
     
 0.857
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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