STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000000219annotation not available (472 aa)    
Predicted Functional Partners:
LOC114651172
Probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein.
    
 0.853
ENSECRP00000019819
annotation not available
    
 0.850
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.791
ENSECRP00000004184
annotation not available
   
 0.757
LOC114648548
Cytochrome b5 reductase 4.
   
 0.738
pla2g4a
Phospholipase A2 group IVA.
    
  0.707
LOC114646942
Cytochrome P450 26C1.
  
  
  0.690
bard1
BRCA1 associated RING domain 1.
    
 0.682
LOC114651640
Cytochrome P450 26B1.
  
 0.679
wrn
WRN RecQ like helicase.
   
 0.666
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.