STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dll3Delta like canonical Notch ligand 3. (662 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1.
   
0.957
LOC114658668
Neurogenic locus notch homolog protein 2-like.
    
0.877
ENSECRP00000007679
annotation not available
  
 
0.793
LOC114667713
Neurogenic locus notch homolog protein 2-like.
    
0.786
arid4a
AT-rich interaction domain 4A.
    
 0.715
arid4b
AT-rich interaction domain 4B.
    
 0.715
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.700
ENSECRP00000011256
annotation not available
   
  0.699
ENSECRP00000027318
annotation not available
    
0.695
dll4
Delta like canonical Notch ligand 4.
  
  
 
0.687
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.