STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd9Potassium channel tetramerization domain containing 9. (388 aa)    
Predicted Functional Partners:
mocs1
Molybdenum cofactor synthesis 1.
  
 
  0.865
hddc3
HD domain containing 3.
    
  0.859
kmt5b
Lysine methyltransferase 5B.
    
  0.818
LOC114643793
Histone-lysine N-methyltransferase KMT5C-like.
    
  0.818
pklr
Pyruvate kinase L/R.
   
 0.781
parp6
poly(ADP-ribose) polymerase family member 6.
   
 0.781
parp8
poly(ADP-ribose) polymerase family member 8.
   
 0.781
pkm
Pyruvate kinase M1/2.
   
 0.781
top2b
DNA topoisomerase II beta.
   
 
 0.760
ENSECRP00000033374
annotation not available
   
 
 0.760
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.