STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btaf1B-TFIID TATA-box binding protein associated factor 1. (1866 aa)    
Predicted Functional Partners:
tbp
TATA-box binding protein.
    
 
 0.954
LOC114666721
TATA-box-binding protein-like.
    
 
 0.954
dr1
Down-regulator of transcription 1.
    
 
 0.950
drap1
DR1 associated protein 1.
    
 
 0.896
LOC114666389
Dr1-associated corepressor-like.
    
 
 0.896
tbpl1
TATA-box binding protein like 1.
    
 
 0.888
ENSECRP00000008133
annotation not available
    
 
 0.773
phf12
PHD finger protein 12.
   
 
 0.722
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
  
 
0.693
LOC114662119
Probable global transcription activator SNF2L1.
  
 
0.691
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.