STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgaGlycoprotein hormones, alpha polypeptide. (119 aa)    
Predicted Functional Partners:
fshb
Follicle stimulating hormone subunit beta.
   
 
 0.959
LOC114661359
Gonadotropin subunit beta-like.
   
 
 0.930
tshb
Thyroid stimulating hormone subunit beta.
     
 0.868
ENSECRP00000019977
annotation not available
   
 
  0.821
tshr
Thyroid stimulating hormone receptor.
   
 
  0.821
ENSECRP00000010702
annotation not available
   
 
  0.678
ENSECRP00000026930
annotation not available
   
 
  0.678
ENSECRP00000026966
annotation not available
   
 
  0.678
ENSECRP00000004917
annotation not available
   
 
  0.561
ENSECRP00000006026
annotation not available
   
 
  0.561
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.