STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001019annotation not available (71 aa)    
Predicted Functional Partners:
tp53
Tumor protein p53.
   
 0.921
kmt2e
Lysine methyltransferase 2E.
    
 0.879
smyd1
SET and MYND domain containing 1.
   
 0.846
suv39h1
Suppressor of variegation 3-9 homolog 1.
   
 
 0.845
prdm2
PR/SET domain 2.
    
 0.841
LOC114668927
Histone-lysine N-methyltransferase SETMAR.
     
 0.839
dot1l
DOT1 like histone lysine methyltransferase.
    
 0.837
setd1a
SET domain containing 1A, histone lysine methyltransferase.
    
 0.811
setd1b
SET domain containing 1B, histone lysine methyltransferase.
    
 0.811
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.777
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.