Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb9Zinc finger and BTB domain containing 9. (673 aa)    
Predicted Functional Partners:
mafg
MAF bZIP transcription factor G.
    
 0.587
ENSECRP00000011256
annotation not available
    
  0.585
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
  0.555
gart
annotation not available
     
  0.531
tapbp
TAP binding protein.
    
 
 0.446
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.438
slc38a8
Solute carrier family 38 member 8.
    
 0.434
dhx35
DEAH-box helicase 35.
   
 
 0.432
mvb12b
Multivesicular body subunit 12B.
      
 0.424
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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