STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001089annotation not available (477 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.877
snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.824
ube2i
Ubiquitin conjugating enzyme E2 I.
    
   0.817
ptbp2
Polypyrimidine tract binding protein 2.
  
0.799
ptbp3
Polypyrimidine tract binding protein 3.
  
0.799
ptbp1
Polypyrimidine tract binding protein 1.
  
0.798
LOC114661956
SUMO-conjugating enzyme UBC9-like.
    
   0.785
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 
 0.784
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 
 0.779
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 
  0.774
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.