Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001142annotation not available (109 aa)    
Predicted Functional Partners:
tmem164
Transmembrane protein 164.
      
 0.728
tmem14a
Transmembrane protein 14A.
      
 0.709
fam91a1
Family with sequence similarity 91 member A1.
      
 0.692
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
      
 0.618
adcyap1
Adenylate cyclase activating polypeptide 1.
   
  
 0.565
mras
Muscle RAS oncogene homolog.
   
  
 0.546
fras1
Fraser extracellular matrix complex subunit 1.
      
 0.537
dennd1a
DENN domain containing 1A.
      
 0.537
apoh
Apolipoprotein H.
      
 0.533
tjp3
Tight junction protein 3.
      
 0.529
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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