STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001151annotation not available (354 aa)    
Predicted Functional Partners:
gnal
G protein subunit alpha L.
    
 0.601
gnas
GNAS complex locus.
    
 0.601
ENSECRP00000011256
annotation not available
    
  0.562
gng2
G protein subunit gamma 2.
    
  0.491
gng4
G protein subunit gamma 4.
    
  0.491
LOC114662234
5-hydroxytryptamine receptor 2A-like.
    
 0.468
edn1
Endothelin 1.
    
 0.466
ENSECRP00000012409
annotation not available
    
 0.465
LOC114662751
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.462
adcyap1
Adenylate cyclase activating polypeptide 1.
    
 0.459
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.