STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001230annotation not available (555 aa)    
Predicted Functional Partners:
ENSECRP00000013032
annotation not available
      
 0.566
LOC114664292
GLIPR1-like protein 1.
      
 0.509
b3galnt2
beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.495
ttll4
Tubulin tyrosine ligase like 4.
    
 
 0.456
armc2
Armadillo repeat containing 2.
    
 
 0.428
ythdc1
YTH domain containing 1.
      
 0.428
ttll11
Tubulin tyrosine ligase like 11.
      
 0.428
ttll6
Tubulin tyrosine ligase like 6.
      
 0.422
eral1
Era like 12S mitochondrial rRNA chaperone 1.
  
 
 0.421
haus1
HAUS augmin like complex subunit 1.
   
  0.409
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.