STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114646014Toll-like receptor 2. (859 aa)    
Predicted Functional Partners:
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.970
tirap
TIR domain containing adaptor protein.
    
 0.941
tollip
Toll interacting protein.
    
 0.922
cd14
CD14 molecule.
     
  0.868
rac2
Rac family small GTPase 2.
   
 0.853
rac1
Rac family small GTPase 1.
   
 0.853
rac3
Rac family small GTPase 3.
   
 0.853
tlr5
Toll like receptor 5.
   
 0.846
LOC114652783
Toll-like receptor 6.
     
 0.833
LOC114651904
Toll-like receptor 6.
     
 0.833
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.