STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clk2CDC like kinase 2. (517 aa)    
Predicted Functional Partners:
ENSECRP00000025098
annotation not available
 
 
 
 0.750
ythdc2
YTH domain containing 2.
   
 
 0.584
srsf1
Serine and arginine rich splicing factor 1.
    
 
 0.583
srpk2
SRSF protein kinase 2.
    
 
0.577
ENSECRP00000019290
annotation not available
    
 
0.577
ENSECRP00000019312
annotation not available
    
 
 0.577
srpk3
SRSF protein kinase 3.
    
 
0.577
ENSECRP00000032303
annotation not available
    
 
0.577
srsf2
Serine and arginine rich splicing factor 2.
    
 
 0.525
ENSECRP00000022631
annotation not available
   
   0.505
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.