STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nuak1NUAK family kinase 1. (662 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11.
    
 0.685
tp53
Tumor protein p53.
    
 0.603
nt5dc3
5'-nucleotidase domain containing 3.
      
 0.601
LOC114651133
Probable ubiquitin carboxyl-terminal hydrolase FAF-X.
    
 
 0.536
ENSECRP00000014870
annotation not available
    
 
 0.536
ENSECRP00000014885
annotation not available
    
 
 0.536
ENSECRP00000014899
annotation not available
    
 
 0.536
btrc
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.505
fbxw11
F-box and WD repeat domain containing 11.
    
   0.505
mettl9
Methyltransferase like 9.
      
 0.465
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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