STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prccProline rich mitotic checkpoint control factor. (462 aa)    
Predicted Functional Partners:
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 0.990
xab2
XPA binding protein 2.
   
 
 0.986
snw1
SNW domain containing 1.
     
 0.985
ppie
Peptidylprolyl isomerase E.
    
 0.982
znf830
Zinc finger protein 830.
   
 
 0.923
ppil2
Peptidylprolyl isomerase like 2.
   
 0.882
prpf19
pre-mRNA processing factor 19.
    
 
 0.732
ppil3
Peptidylprolyl isomerase like 3.
    
 0.665
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
   
 0.586
ppia
Peptidylprolyl isomerase A.
    
 0.573
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.