STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001352annotation not available (593 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor bound protein 2.
    
 0.980
alkal2
ALK and LTK ligand 2.
    
 0.929
gab1
GRB2 associated binding protein 1.
    
 0.916
LOC114656302
Tyrosine-protein phosphatase non-receptor type 11-like.
    
 0.862
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.862
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.862
plcg1
Phospholipase C gamma 1.
    
 0.854
LOC114653748
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
    
 0.854
LOC114658113
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like.
    
 0.854
pik3r1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.835
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.