STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001396annotation not available (267 aa)    
Predicted Functional Partners:
efhc2
EF-hand domain containing 2.
   
 
 0.986
ENSECRP00000030181
annotation not available
   
 
 0.984
efhc1
EF-hand domain containing 1.
   
 
 0.978
cfap52
Cilia and flagella associated protein 52.
   
 0.970
tekt2
Tektin 2.
   
 
 0.967
spag8
Sperm associated antigen 8.
   
 
 0.965
ENSECRP00000002588
annotation not available
   
 
 0.944
fam183a
Family with sequence similarity 183 member A.
    
 
 0.933
cfap161
Cilia and flagella associated protein 161.
  
 
 0.933
tekt3
Tektin 3.
   
 
 0.904
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.