STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
api5Apoptosis inhibitor 5. (526 aa)    
Predicted Functional Partners:
polr2b
RNA polymerase II subunit B.
   
    0.978
ilf3
Interleukin enhancer binding factor 3.
   
 
 0.530
tbc1d23
TBC1 domain family member 23.
   
   0.499
ENSECRP00000007639
annotation not available
   
   0.499
fgf20
Fibroblast growth factor 20.
    
 
 0.484
fgf1
Fibroblast growth factor 1.
    
 
 0.484
fgf9
Fibroblast growth factor 9.
    
 
 0.484
fgf16
Fibroblast growth factor 16.
    
 
 0.484
ENSECRP00000016212
annotation not available
    
 
 0.484
LOC114649036
Fibroblast growth factor 11-like.
    
 
 0.484
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.