Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114652793Neurexin-2-like. (883 aa)    
Predicted Functional Partners:
ENSECRP00000019921
annotation not available
 
   
0.980
ENSECRP00000017633
annotation not available
    
 0.968
nlgn3
Neuroligin 3.
    
 0.966
nlgn2
Neuroligin 2.
    
 0.955
LOC114650929
Neuroligin-4, X-linked.
    
 0.955
ENSECRP00000001175
annotation not available
 
      0.900
ENSECRP00000001209
annotation not available
 
      0.899
ENSECRP00000001535
annotation not available
 
     
0.899
nrxn1-2
Neurexin 1.
 
      0.899
nrxn3
Neurexin 3.
 
      0.898
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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