STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pyroxd2Pyridine nucleotide-disulphide oxidoreductase domain 2. (579 aa)    
Predicted Functional Partners:
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.890
ENSECRP00000018037
annotation not available
  
 
 0.799
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.799
appbp2
Amyloid beta precursor protein binding protein 2.
   
   0.784
coq2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.774
tpd52l2
TPD52 like 2.
      
 0.730
gpd2
Glycerol-3-phosphate dehydrogenase 2.
    
 0.706
ENSECRP00000021023
annotation not available
     
  0.695
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
    
  0.683
cryl1
Crystallin lambda 1.
  
 
 0.679
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.