STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647137Mitoferrin-2. (381 aa)    
Predicted Functional Partners:
nars2
asparaginyl-tRNA synthetase 2, mitochondrial.
 
   
  0.928
fxn
Frataxin.
    
 
 0.844
gatb
glutamyl-tRNA amidotransferase subunit B.
     
  0.695
nars1
asparaginyl-tRNA synthetase 1.
   
 
  0.663
ENSECRP00000017390
annotation not available
   
 
  0.663
fech
Ferrochelatase.
   
  
 0.637
LOC114644460
ATP-binding cassette sub-family B member 10, mitochondrial-like.
    
 
 0.634
arih1
Ariadne RBR E3 ubiquitin protein ligase 1.
 
      0.566
slc25a36
Solute carrier family 25 member 36.
    
 
 0.541
slc25a33
Solute carrier family 25 member 33.
    
 
 0.541
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.