STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd7SET domain containing 7, histone lysine methyltransferase. (332 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
    
 0.968
suz12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.968
kdm2a
Lysine demethylase 2A.
    
 0.961
fbxl19
F-box and leucine rich repeat protein 19.
    
 0.961
kdm2b
Lysine demethylase 2B.
    
 0.961
dot1l
DOT1 like histone lysine methyltransferase.
    
 0.913
wdr73
WD repeat domain 73.
    
 0.897
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.897
LOC114641485
Histone-binding protein RBBP7.
    
 0.897
kmt2e
Lysine methyltransferase 2E.
   
 0.894
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.