Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001720annotation not available (364 aa)    
Predicted Functional Partners:
ENSECRP00000022909
annotation not available
    
 
 0.540
zbtb20
Zinc finger and BTB domain containing 20.
      
 0.534
gprc5b
G protein-coupled receptor class C group 5 member B.
      
 0.534
glra2
Glycine receptor alpha 2.
      
 0.534
slitrk1
SLIT and NTRK like family member 1.
   
 0.484
erbb3
Erb-b2 receptor tyrosine kinase 3.
    
  0.458
erbb4
Erb-b2 receptor tyrosine kinase 4.
    
  0.458
egfr
Epidermal growth factor receptor.
    
  0.458
erbb2
Erb-b2 receptor tyrosine kinase 2.
    
  0.458
LOC114651160
Glutamate receptor ionotropic, kainate 1.
    
 
 0.448
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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