STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647141Uncharacterized protein K02A2.6-like. (1293 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
  0.794
il20rb
Interleukin 20 receptor subunit beta.
     
 0.704
il20ra
Interleukin 20 receptor subunit alpha.
     
  0.693
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.676
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.626
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.622
lifr
LIF receptor subunit alpha.
     
  0.595
cntfr
Ciliary neurotrophic factor receptor.
     
  0.595
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.584
rpa1
Replication protein A1.
    
 0.546
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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