STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmd3FERM domain containing 3. (580 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.734
gps1
G protein pathway suppressor 1.
    
  0.605
cops2
COP9 signalosome subunit 2.
    
  0.596
cops4
COP9 signalosome subunit 4.
    
  0.594
cops3
COP9 signalosome subunit 3.
    
  0.594
cops8
COP9 signalosome subunit 8.
    
  0.594
basp1
Brain abundant membrane attached signal protein 1.
    
  0.593
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.510
camk2b
Calcium/calmodulin dependent protein kinase II beta.
   
 0.505
camk2d
Calcium/calmodulin dependent protein kinase II delta.
   
 0.505
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.