STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dtnbDystrobrevin beta. (649 aa)    
Predicted Functional Partners:
snta1
Syntrophin alpha 1.
   
 0.976
sntb2
Syntrophin beta 2.
   
 0.976
ENSECRP00000013246
annotation not available
 
  
 0.938
utrn
Utrophin.
    
 0.920
dmd
Dystrophin.
    
 0.920
drp2
Dystrophin related protein 2.
    
 0.920
sntg2
Syntrophin gamma 2.
    
 0.918
sntg1
Syntrophin gamma 1.
    
 0.918
dag1
Dystroglycan 1.
    
 0.894
ppp1r21
Protein phosphatase 1 regulatory subunit 21.
    
   0.869
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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