STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001899annotation not available (415 aa)    
Predicted Functional Partners:
slc39a14
Solute carrier family 39 member 14.
   
 0.614
slc39a8
Solute carrier family 39 member 8.
   
 0.612
slc30a6
Solute carrier family 30 member 6.
  
 
 
 0.526
slc30a4
Solute carrier family 30 member 4.
  
 
 
0.507
slc39a13
Solute carrier family 39 member 13.
   
 0.499
slc11a2
Solute carrier family 11 member 2.
   
 
 0.468
slc30a5
Solute carrier family 30 member 5.
  
 
 
0.439
slc30a3
Solute carrier family 30 member 3.
 
 
 
0.437
slc39a4
Solute carrier family 39 member 4.
   
 0.433
ENSECRP00000030678
annotation not available
 
 
  
0.433
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.