STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sipa1Signal-induced proliferation-associated 1. (1226 aa)    
Predicted Functional Partners:
afdn
Afadin, adherens junction formation factor.
    
 0.740
rap1b
RAP1B, member of RAS oncogene family.
    
 0.710
LOC114647779
Ras-related protein Rap-1A.
    
 0.710
rap2b
RAP2B, member of RAS oncogene family.
    
 0.669
rap2a
RAP2A, member of RAS oncogene family.
    
 0.669
rapgefl1
Rap guanine nucleotide exchange factor like 1.
   
 0.620
rap2c
RAP2C, member of RAS oncogene family.
    
 0.619
LOC114658542
GTP-binding protein Di-Ras2-like.
    
 0.608
diras1
DIRAS family GTPase 1.
    
 0.608
diras2
DIRAS family GTPase 2.
    
 0.608
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.