Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
guk1Guanylate kinase 1. (210 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.952
adsl
Adenylosuccinate lyase.
   
 0.945
ENSECRP00000000849
annotation not available
   
 0.937
hprt1
Hypoxanthine phosphoribosyltransferase 1.
    
 0.918
hddc3
HD domain containing 3.
  
 
 0.916
gmpr2
Guanosine monophosphate reductase 2.
    
 0.913
gmpr
Guanosine monophosphate reductase.
    
 0.913
pde6c
Phosphodiesterase 6C.
   
 
 0.911
pde6a
Phosphodiesterase 6A.
   
 
 0.910
LOC114649219
Deoxyguanosine kinase, mitochondrial-like.
    
 0.907
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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