Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001940annotation not available (160 aa)    
Predicted Functional Partners:
zyx
Zyxin.
    
   0.886
pym1
PYM homolog 1, exon junction complex associated factor.
    
   0.885
pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
    
  0.812
acadm
acyl-CoA dehydrogenase medium chain.
  
 0.797
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.779
aldh5a1
Aldehyde dehydrogenase 5 family member A1.
  
 0.752
c1h12orf4
Chromosome 1 C12orf4 homolog.
   
   0.724
lrrc14
Leucine rich repeat containing 14.
    
 0.690
atp5f1d
ATP synthase F1 subunit delta.
    
 0.688
LOC114669007
Carbonyl reductase [NADPH] 1-like.
   
 0.683
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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