STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000001944annotation not available (267 aa)    
Predicted Functional Partners:
grap2
GRB2 related adaptor protein 2.
   
 0.582
LOC114656119
Thioredoxin domain-containing protein 3 homolog.
    
 0.525
pla2g4a
Phospholipase A2 group IVA.
    
  0.520
grb2
Growth factor receptor bound protein 2.
    
 0.512
LOC114661378
WD repeat-containing protein 90-like.
    
  0.503
traf7
TNF receptor associated factor 7.
    
  0.499
ENSECRP00000001571
annotation not available
   
 0.487
gak
Cyclin G associated kinase.
   
 0.487
fmn2
Formin 2.
    
 0.474
ENSECRP00000032698
annotation not available
    
 0.474
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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