Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
LOC114645752Sodium/potassium/calcium exchanger 3-like. (541 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog.
    
  0.735
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.704
slc8a3
Solute carrier family 8 member A3.
   
 
 0.677
slc8a1
Solute carrier family 8 member A1.
   
 
 0.677
LOC114668574
Sodium/calcium exchanger 2-like.
   
 
 0.677
get3
Guided entry of tail-anchored proteins factor 3, ATPase.
  
   0.623
ENSECRP00000013783
annotation not available
   
 
 0.588
ENSECRP00000011812
annotation not available
    
   0.505
ENSECRP00000011871
annotation not available
    
   0.505
cux2
Cut like homeobox 2.
    
   0.505
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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